مجله دانشکده پزشکی دانشگاه علوم پزشکی تهران در بانک‌های اطلاعاتی و مجموعه‌های زیر نمایه می‌شود:

Scopus
EMBASE
EBSCO
Cambridge Scientific Abstracts (CSA)
CAB Abstracts (CABI)
Chemical Abstract Service (CAS)
Directory of Open Access Journals (DOAJ)
Google Scholar
ProQuest
Psych Info
ULRICH΄S
IMEMR
Scientific Information Database (SID)
Magiran
Iran Ministry of Health and Medical Education (Research and Technology Development Center)
Islamic World Science Citation Center (ISC)

Other links:
Microsoft Academic
U.S. National Library of Medicine
AcademicKeys
Open Academic Journals Index (OAJI)
Open Access Library (OALib)
ResearchGate
Academic Journals Database
MIAR (University of Barcelona)
JournalTOCs
Ingenta Connect
Citefactor (Directory Indexing of International Research Journals)
Committee on Publication Ethics (COPE)
AMEDEO
San Diego State University